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Yang, Y., J. Y. Choi, K. Choi, M. Pierce, D. Gannon, and S. Kim, BioVLAB-Microarray: Microarray Data Analysis in Virtual Environment, Proceedings of the IEEE International Conference on e-Science 2008, http://escience2008.iu.edu, Indianapolis, Dec 07 2008.  Download: eScience2008-Youngik.ppt (3.07 MB)
Yang, Y., J. Y. Choi, K. Choi, M. Pierce, D. Gannon, and S. Kim, "BioVLAB-Microarray: Microarray Data Analysis in Virtual Environment" IEEE Fourth International Conference on eScience, 2008, Indianapolis, IN, IEEE Computer Society, pp. 159-165, Dec 2008, http://10.1109/eScience.2008.57, http://grids.ucs.indiana.edu/ptliupages/publications/BioVLAB.pdf. Abstract
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Thomas, M., J. Burruss, L. Cinquini, G. C. Fox, D. Gannon, L. Gilbert, G. von Laszewski, K. Jackson, D. Middleton, R. Moore, et al., "Grid Portal Architectures for Scientific Applications" Scientific Discovery through Advanced Computing (SciDAC 2005), vol. 16, San Francisco, CA, IOP Science, pp. 596-600, Jun 2005, http://10.1088/1742-6596/16/1/083, http://grids.ucs.indiana.edu/ptliupages/publications/jpconf5_16_083.pdf. Abstract
Thomas, M. P., J. Burruss, L. Cinquini, G. C. Fox, D. Gannon, L. Gilbert, G. von Laszewski, K. Jackson, D. Middleton, R. Moore, et al., Grid Portal Architectures for Scientific Applications, SciDAC 2005 meeting, http://www.csm.ornl.gov/workshops/SciDAC2005/, San Francisco, Jun 26 2005.  Download: DOE ScidDAC-Portals-Poster.jpg (1.36 MB)
Taylor, I., E. Deelman, D. Gannon, and M. Shields, Workflow for eScience : Springer-Verlag, 2006.
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Simms, S. C., M. Davy, B. Hammond, M. Link, C. Stewart, R. Bramley, B. Plale, D. Gannon, M. - H. Baik, S. Teige, et al., "All in a day's work: advancing data-intensive research with the data capacitor" Conference on High Performance Networking and Computing, Tampa, FL, ACM, pp. 244, Nov 2006, http://doi.acm.org/10.1145/1188455.1188711. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "A Performance Evaluation of the Karma Provenance Framework for Scientific Workflows" International Provenance and Annotation Workshop (IPAW'06), vol. 4145, Chicago, IL USA, Springer-Verlag, pp. 222-236, Jun 2006, 10.1007/11890850_23. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "A survey of data provenance in e-Science" ACM SIGMOD Record, vol. 34, no. 3, pp. 31-36, Sep 2005, http://doi.acm.org/10.1145/1084805.1084812. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "Karma2: Provenance Management for Data Driven Workflows" International Journal of Web Services Research, vol. 5, no. 2, pp. 1-22, Apr 2008, http://www.cs.indiana.edu/~plale/papers/Simmhan-JWSR-07.pdf. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "Query Capabilities of the Karma Provenance Framework" Concurrency and Computation: Practice and Experience, vol. 20, no. 5: John Wiley and Sons, pp. 441-451, Apr 2008, 2007, 10.1002/cpe.1229. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "Towards a Quality Model for Effective Data Selection in Collaboratories" IEEE Workshop on Workflow and Data Flow for Scientific Applications (SciFlow06), held in conjunction with ICDE 2006, Atlanta, IEEE, pp. 72, Apr 2006, 10.1109/ICDEW.2006.150 , http://www.cs.indiana.edu/dde/papers/SimmhanSciFlow06.pdf. Abstract
Simmhan, Y. L., B. Plale, and D. Gannon, "A Survey of Data Provenance Techniques" Computer Science Department, no. TR-618, Bloomington, IN, Indiana University, pp. 25, Aug 2005, http://www.cs.indiana.edu/pub/techreports/TR618.pdf. Abstract
Simmhan, Y., B. Plale, and D. Gannon, "A Framework for Collecting Provenance in Data-Centric Scientific Workflows" The IEEE International Conference on Web Service (ICWS), Chicago, IL, IEEE, pp. 427-436, Sep 2006, 10.1109/ICWS.2006.5. Abstract
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Ramakrishnan, L., B. Plale, and D. Gannon, "WORKEM: Representing and Emulating Distributed Scientific Workflow Execution State" The 10th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid2010), Melbourne, Australia, IEEE, pp. 283, May 2010, 10.1109/CCGRID.2010.89 . Abstract
Ramakrishnan, L., and D. Gannon, "A Survey of Distributed Workflow Characteristics and Resource Requirements" Computer Science Department, no. TR-671, Bloomington, IN, Indiana University, pp. 20, Sep 2008, http://www.cs.indiana.edu/pub/techreports/TR671.pdf. Abstract
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Qiu, X., J. Ekanayake, S. Beason, T. Gunarathne, G. C. Fox, R. Barga, and D. Gannon, "Cloud Technologies for Bioinformatics Applications" 2nd ACM Workshop on Many-Task Computing on Grids and Supercomputers (Supercomputing'09), Portland, OR, Nov 09, 2009, http://grids.ucs.indiana.edu/ptliupages/publications/MTAGS09-23.pdf. Abstract
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Plale, B., D. Gannon, D. Reed, S. Graves, K. Droegemeier, B. Wilhelmson, and M. Ramamurthy, "Towards Dynamically Adaptive Weather Analysis and Forecasting in LEAD" Workshop on “Dynamic Data Driven Application System” at ICCS, vol. 3515, Atlanta, GA, Springer-Verlag, pp. 624-631, May 2005, 10.1007/11428848_81. Abstract
Plale, B., R. Clark, C. Mattocks, K. Brewster, R. Barthelmie, K. Droegemeier, D. Gannon, S. Graves, S. Jensen, W. Mahoney, et al., Atmospheric Sciences and Informatics EarthCube Driver Whitepaper: Technical Infrastructure , Oct 2011, http://semanticommunity.info/@api/deki/files/13797/=009_Plale.pdf.
Plale, B., D. Gannon, J. Alameda, B. Wilhelmson, S. Hampton, A. Rossi, and K. Droegemeier, "Active Management of Scientific Data" IEEE Internet Computing Special Issue on Internet Access to Scientific Data, vol. 9, no. 1, pp. 27-34, Jan 2005, 10.1109/MIC.2005.4 . Abstract
Plale, B., D. Gannon, Y. Huang, G. Kandaswamy, S. Pallickara, and A. Slominski, "Cooperating Services for Managing Data Driven Computational Experimentation" Computing in Science and Engineering, vol. 7, no. 5, pp. 34-43, Sep 2005, http://doi.ieeecomputersociety.org/10.1109/MCSE.2005.91. Abstract
Plale, B., D. Gannon, J. Brotzge, K. Droegemeier, J. Kurose, D. McLaughlin, R. Wilhelmson, S. Graves, M. Ramamurthy, R. Clark, et al., "CASA and LEAD: Adaptive Cyberinfrastructure for Real-Time Multiscale Weather Forecasting" Computer, vol. 39, no. 11, pp. 56-63, Nov 2006, 10.1109/MC.2006.375 . Abstract
Perera, S., S. Marru, T. Gunarathne, D. Gannon, and B. Plale, "Application of Management Frameworks: A Case Study on a Large Scale E-science Project" International Conference on Web Services (ICWS), Los Angeles, CA USA, IEEE Computer Society, pp. 519-526, Jul 2009, http://doi.ieeecomputersociety.org/10.1109/ICWS.2009.52. Abstract
Perera, S., S. Marru, T. Gunarathne, D. Gannon, and B. Plale, "Application of Management Frameworks to Manage Workflow-Based Systems: A Case Study on a Large Scale E-science Project" International Conference on Web Services (ICWS), Los Angeles, CA , IEEE, pp. 519-526, Jul 2009, 10.1109/ICWS.2009.52 . Abstract
Pallickara, S. L., B. Plale, L. Fang, and D. Gannon, "End-to-End Trustworthy Data Access in Data-Oriented Scientific Computing" IEEE Cluster Computing and Grid (CCGrid'06), vol. 1, Singapore, IEEE, pp. 395-400, May 2006, 10.1109/CCGRID.2006.41 . Abstract
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Gil, Y., E. Deelman, M. Ellisman, T. Fahringer, G. C. Fox, D. Gannon, C. Goble, M. Livny, L. Moreau, and J. Myers, Report on the 2006 NSF Workshop on Challenges of Scientific Workflows Technical Report , Bloomington, IN, Indiana University, Feb 26 2007.